Introduction: Melatonin, pineal hormone, regulates the dynamic physiological adaptations that occur in seasonally breeding mammals in response to the changes in day length. The impact of melatonin on the regulation of reproduction in humans is still questionable. The aim of this study was to determine the effects of endogenous melatonin on human sperm routine parameters (motility, morphology, concentration) and DNA fragmentation index (DFI) Materials and Methods: Human semen samples were divided into 5 equal parts and assessed for melatonin and antioxidant levels. In addition, DFI was examined by sperm chromatin dispersion test.Results: Endogenous melatonin with DNA fragmentation and semen parameters (motility, morphology, concentration) was not shown any significant correlation. In addition, no correlation between seminal plasma antioxidant and above mentioned parameters was observed.Conclusion: Lack of significant correlation between antioxidant and melatonin with routine sperm parameters suggests that the semen melatonin cannot affect on the sperm parameters. This could be mainly due to the lifestyle of the patients, which might not allow the endogenous melatonin to have the essential effects on the sperm function.